Identification of pure isolates of filamentous fungi and yeast
Test Id | Reporting Name | Available Separately | Always Performed |
---|---|---|---|
D2F | D2 Fungal Sequencing Identification | No, (Bill Only) | No |
FUNA | Fungal Ident Panel A | No, (Bill Only) | No |
FUNB | Fungal Ident Panel B | No, (Bill Only) | No |
LCCI | Ident Rapid PCR Coccidioides | No, (Bill Only) | No |
LCHB | Id, Histoplasma/Blastomyces PCR | No, (Bill Only) | No |
RMALF | Id MALDI-TOF Mass Spec Fungi | No, (Bill Only) | No |
RMALY | Id MALDI-TOF Mass Spec Yeast | No, (Bill Only) | No |
LCCA | Id, Candida auris Rapid PCR | No, (Bill Only) | No |
When this test is ordered, the reflex tests may be performed and charged. All fungal organisms submitted will be identified and billed as appropriate.
Macroscopic/Microscopic/D2 rDNA Gene Sequencing/Real-Time Polymerase Chain Reaction (rtPCR)/Matrix-Assisted Laser Desorption/Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS)
Dimorphic Pathogen Identification Confirmation: D2 rDNA Gene Sequencing/rtPCR/MALDI-TOF MS
Dermatophytes
Fungal ID
Fungal Identification
Fungi
Fungi ID
Fungi Identification
Fungus
Fungus ID
Fungus Identification
Fungus Referred for Identification
Identification of Fungus
Identification of Yeast
Mold
Referral for Identification
Yeast ID
Yeast Identification
Yeast Referred for Identification
Identification of Candida
Identification of Fungi
Identification of Mold
When this test is ordered, the reflex tests may be performed and charged. All fungal organisms submitted will be identified and billed as appropriate.
Varies
1. See Infectious Specimen Shipping Guidelines in Special Instructions for shipping information.
2. Place specimen in a large infectious container (T146) and label as an etiologic agent/infectious substance, if appropriate.
1. Specimen source is required.
2. Isolate description is required: Gram stain reaction, morphology, tests performed.
Question ID | Description | Answers |
---|---|---|
Q00M0024 | Specimen Source (Required) and Isolate Description-Stain reaction, morphology, tests performed (Required) |
Specimen Type: Organism in pure culture
Supplies: Infectious Container, Large (T146)
Container/Tube:
Preferred: Sabouraud dextrose agar slant
Acceptable: Inhibitory mold agar slant
Specimen Volume: Isolated mold or yeast
Collection Instructions:
If not ordering electronically, complete, print, and send a Microbiology Test Request (T244) with the specimen.
Agar plate | Reject |
Specimen Type | Temperature | Time | Special Container |
---|---|---|---|
Varies | Ambient (preferred) | ||
Refrigerated |
Identification of pure isolates of filamentous fungi and yeast
When this test is ordered, the reflex tests may be performed and charged. All fungal organisms submitted will be identified and billed as appropriate.
Organisms are referred for identification or to confirm an identification made elsewhere. This may provide helpful information regarding the significance of the organism, its role in the disease process, and its possible origin.
Not applicable
Genus and species are reported on fungal isolates whenever possible.
If the organism is received in mixed culture or contaminated, the
Ashbee HR: General approaches for direction detection and identification of fungi. In: Carroll KC, Pfaller MA, Landry ML, et al, eds. Manual of Clinical Microbiology. 12th ed. Vol 1. ASM Press; 2019:2035-2055
Identification of fungi is based on colonial and microscopic morphology, matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry, laboratory-developed real-time polymerase chain reaction (PCR) assays and/or D2 rDNA gene sequencing, as applicable.(Babady NE, Buckwalter SP, Hall L, Le Febre KM, Binnicker MJ, Wengenack NL: Detection of Blastomyces dermatitidis and Histoplasma capsulatum from culture isolates and clinical specimens by use of real-time PCR. J Clin Microbiol. 2011 Sep;49[9]:3204-3208; Binnicker MJ, Buckwalter SP, Eisberner JJ, et al: Detection of Coccidioides species in clinical specimens by real-time PCR. J Clin Microbiol. 2007 Jan;45[1]:173-178; Dhiman N, Hall L, Wohlfiel SL, Buckwalter SP, Wengenack NL: Performance and cost analysis of matrix-assisted laser desorption ionization time of flight mass spectrometry for routine identification of yeast. J Clin Microbiol. 2011 Apr;49[4]:1614-1616; Hall L, Wohlfiel SL, Roberts GD: Experience with the MicroSeq D2 large-subunit ribosomal DNA sequencing kit for identification of filamentous fungi encountered in the clinical laboratory. J Clin Microbiol. 2004 Feb;42[2]:622-626; Theel ES, Schmidt BH, Hall L, et al: Formic acid-based direct, on-plate testing of yeast and Corynebacterium species by Bruker Biotyper matrix-assisted laser desorption ionization-time of flight mass spectrometry. J Clin Microbiol. 2012 Sep;50[9]:3093-3095; Theel ES, Hall L, Mandrekar J, Wengenack NL: Dermatophyte identification using matrix-assisted laser desorption ionization-time of flight mass spectrometry. J Clin Microbiol. 2011 Dec;49[12]:4067-4071)
Monday through Saturday
This test has been cleared, approved, or is exempt by the US Food and Drug Administration and is used per manufacturer's instructions. Performance characteristics were verified by Mayo Clinic in a manner consistent with CLIA requirements.
87107-Culture, fungi, definitive identification
87106-Culture, fungi, definitive identification, each organism; yeast (if appropriate)
87106-Id MALDI-TOF Mass Spec Yeast (if appropriate)
87107-Id MALDI-TOF Mass Spec Fungi (if appropriate)
87107-Culture, fungi, definitive identification, each organism; mold (if appropriate)
87107-Fungal identification Panel A (if appropriate)
87107-Fungal identification Panel B (if appropriate)
87150-Identification rapid PCR coccidioides (if appropriate)
87150 x 2-Identification Histoplasma/Blastomyces, PCR (if appropriate)
87153-D2 fungal sequencing Identification (if appropriate)
87150-Id, Candida auris Rapid PCR (if appropriate)
Test Id | Test Order Name | Order LOINC Value |
---|---|---|
FUNID | Culture Referred for ID, Fungus | 42804-5 |
Result Id | Test Result Name |
Result LOINC Value
Applies only to results expressed in units of measure originally reported by the performing laboratory. These values do not apply to results that are converted to other units of measure.
|
---|---|---|
FUNID | Culture Referred for ID, Fungus | In Process |