Test Catalog

Test Id : SCHPV

Human Papillomavirus (HPV) Detection and High-Risk Genotyping, Self-Collect, PCR, Vaginal

Useful For
Suggests clinical disorders or settings where the test may be helpful

Human papillomavirus (HPV) screening for average-risk, asymptomatic individuals who are eligible for primary HPV testing, have barriers to a speculum exam for a clinician-collected cervical sample for screening, and who are able to self-collect a vaginal sample in a healthcare setting

 

This test is not intended for symptomatic patients (eg, pelvic pain, abnormal uterine bleeding).

Method Name
A short description of the method used to perform the test

Real-Time Polymerase Chain Reaction (PCR)

NY State Available
Indicates the status of NY State approval and if the test is orderable for NY State clients.

Yes

Reporting Name
Lists a shorter or abbreviated version of the Published Name for a test

HPV Detect/Geno SelfCollect, Vagina

Aliases
Lists additional common names for a test, as an aid in searching

High Risk HPV

HPV (Human Papillomavirus) PCR

Human Papillomavirus (HPV) Genotyping

Specimen Type
Describes the specimen type validated for testing

Varies

Ordering Guidance

This test is intended for patient collection of vaginal specimens in a clinic/healthcare setting.

 

For clinician collected cervical specimens, order HPV / Human Papillomavirus (HPV) DNA Detection with Genotyping, High-Risk Types by PCR, ThinPrep, Varies.

 

For clinical collected vaginal specimens, order VHPV, Human Papillomavirus (HPV) Vaginal Detection with Genotyping for High-Risk Types by PCR.

Necessary Information

Specimen source is required.

Specimen Required
Defines the optimal specimen required to perform the test and the preferred volume to complete testing

Patient Preparation: For 24 hours prior to specimen self-collection, patients should avoid using feminine hygiene products.

Supplies: Evalyn Brush (T990)

Specimen Type: Vaginal

Collection Container/Tube: Evalyn Brush

Submission Container/Tube: ThinPrep/PreservCyt solution vial

Specimen Volume: 3 mL of solution in ThinPrep/PreservCyt vial

Specimen Stability Information:

Evalyn Brush: Ambient 72 hours

ThinPrep/PreservCyt Vial: Ambient (preferred) 42 days/Refrigerated 42 days

Collection Instructions:

1. Specimen must be collected by the patient in a healthcare setting.

2. Provide patient with a labeled Evalyn brush and the accompanying self-collection instruction pamphlet.

3. Following patient self-collection, ensure that the Evalyn brush is tightly capped and appropriately labeled.

4. Place labeled Evalyn brush in a biosafety bag and send to the laboratory.

5. Perform the following steps prior to shipment to Mayo Clinic Laboratories:

 a. Label PreservCyt (ThinPrep) vial with appropriate patient information.

 b. Uncap PreservCyt vial. Remove pink cap from Evalyn brush.

 c. Depress the pink plunger on the Evalyn brush to expose the brush (white bristles).

 d. Vigorously plunge the brush, smashing the white brush against the bottom and interior wall of the vial 10 times to maximize sample release. Be careful not to splash.

 e. Discard Evalyn brush

 f. Tightly recap the PreservCyt vial.

 g. Submit the PreservCyt vial for testing.

Special Instructions
Library of PDFs including pertinent information and forms related to the test

Specimen Minimum Volume
Defines the amount of sample necessary to provide a clinically relevant result as determined by the testing laboratory. The minimum volume is sufficient for one attempt at testing.

1 mL

Reject Due To
Identifies specimen types and conditions that may cause the specimen to be rejected

Uncapped Evalyn brush (no pink cap)
Specimen containing CytoRich Red preservative fluid
Broken Evalyn brush
Reject

Specimen Stability Information
Provides a description of the temperatures required to transport a specimen to the performing laboratory, alternate acceptable temperatures are also included

Specimen Type Temperature Time Special Container
Varies Ambient (preferred)
Refrigerated

Useful For
Suggests clinical disorders or settings where the test may be helpful

Human papillomavirus (HPV) screening for average-risk, asymptomatic individuals who are eligible for primary HPV testing, have barriers to a speculum exam for a clinician-collected cervical sample for screening, and who are able to self-collect a vaginal sample in a healthcare setting

 

This test is not intended for symptomatic patients (eg, pelvic pain, abnormal uterine bleeding).

Clinical Information
Discusses physiology, pathophysiology, and general clinical aspects, as they relate to a laboratory test

Persistent infection with human papillomavirus (HPV) is the principal cause of cervical cancer. The presence of HPV has been implicated in more than 99% of cervical cancers worldwide, including both cervical squamous cell carcinoma and cervical adenocarcinoma. Before development of invasive cancer, HPV infects the squamous mucosa cells and/or the glandular cells of the endocervix, leading to clonal expansion and morphologic changes. While the HPV-infected cells are restricted to their normal anatomic location, these changes are classified as cervical intraepithelial neoplasia (CIN). The severity of the morphologic changes and the degree to which those changes resemble the morphology of an invasive carcinoma are used to "grade" CIN. In general, high-grade CIN more closely resembles invasive carcinoma morphologically. HPV can also infect other mucosal cells in the anogenital region, such as the vaginal mucosa, leading to the development of HPV-associated intraepithelial neoplasia as well as invasive carcinoma not involving the cervix itself, although this is less common.

 

Human papillomavirus is a small, nonenveloped, double-stranded DNA virus, with a genome of approximately 8000 nucleotides. There are more than 118 different types of HPV and approximately 40 different HPVs can infect the human anogenital mucosa. Only a very small percentage of patients who are exposed to HPV will develop CIN. Of those patients who develop CIN, only a small percentage will progress to invasive cervical cancer. Sexually transmission of HPV is extremely common, with estimates of up to 75% of all women being exposed to HPV at some point. However, almost all infected women will mount an effective immune response and clear the infection within 2 years without long-term health consequences. Both high-risk HPV genotypes (especially HPV-16 and 18), as well as persistent HPV infection (eg, an infection that is not cleared by the patient's immune system over time), are associated with an increased chance of progressing to high-grade CIN and invasive cancer.

 

Data suggest that certain HPV genotypes (eg, HPV types 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68) are high-risk (HR) for the development of cervical cancer and its precursor lesions. Furthermore, HPV types 16 and 18 have been regarded as the genotypes most closely associated with progression to cervical cancer. HPV-16 is the most carcinogenic and is associated with approximately 60% of all cervical cancers, while HPV-18 accounts for approximately 10% to 15% of cervical cancers.

 

In developed countries with cervical cancer screening programs, the Papanicolaou test (ie, Pap smear) has been used since the mid-1950s as the primary tool to morphologically detect CIN, the precursor to cervical cancer. Pap smear screening has decreased death rates due to cervical cancer dramatically, since in many cases CIN can be treated and eliminated (eg, by local excision) before it progresses to invasive carcinoma. Although Pap smears and other liquid-based cytology methods have many advantages, they also have limitations: they require subjective interpretation by a highly trained cytopathologist and misinterpretation can occur, morphologic changes that resemble HPV-associated CIN can be caused by other conditions (eg, inflammation), and Pap smear does not sample every cell within the cervix/anogenital region potentially leading to falsely negative results. Perhaps most importantly, Pap smear does not differentiate between HPV genotypes that are high or low risk for progression to cervical cancer and it does not detect very early infections, which may lack a morphological phenotype.

 

Nucleic acid (DNA) testing by polymerase chain reaction has become a standard, noninvasive method for determining the presence of a cervical HPV infection. Proper implementation of nucleic acid testing for HPV may:

1. Increase the sensitivity of cervical cancer screening programs by detecting high-risk lesions earlier in women aged 30 years and older with normal cytology.

2. Reduce the need for unnecessary colposcopy and treatment in patients aged 21 and older with cytology results showing atypical squamous cells of undetermined significance.

 

Data suggest that individual genotyping for HPV types 16 and 18 can assist in determining appropriate follow-up testing and triaging women at risk for progression to cervical cancer. Studies have shown that the absolute risk of CIN-2 or worse in HPV-16 and/or HPV-18 positive women is 11.4% (95% CI 8.4%-14.8%) compared with 6.1% (95% CI, 4.9%-7.2%) of women positive for other HR-HPV genotypes, and 0.8% (95% CI, 0.3%-1.5%) in HR-HPV-negative women. Based in part on these data, the American Society for Colposcopy and Cervical Pathology now recommends that HPV 16/18 genotyping be performed on women who are positive for HR-HPV but negative by routine cytology. Women who are found to be positive for HPV-16 or -18 may be referred to colposcopy, while women who are negative for genotypes 16 and 18 may have repeat cytology and HR-HPV testing in 12 months.

Reference Values
Describes reference intervals and additional information for interpretation of test results. May include intervals based on age and sex when appropriate. Intervals are Mayo-derived, unless otherwise designated. If an interpretive report is provided, the reference value field will state this.

Negative for human papillomavirus (HPV) genotypes 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68

Interpretation
Provides information to assist in interpretation of the test results

HPV 16 Positive:

Human papillomavirus (HPV) 16 DNA detected. Referral for colposcopy indicated.

 

HPV18 Positive:

HPV18 DNA detected. Referral for colposcopy indicated.

 

HPV High Risk Other Positive:

HPV 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66 and/or 68 DNA detected. Additional testing (Pap/cytology or dual stain) on a clinician-collected cervical/endocervical specimen indicated.

 

HPV 16/18/HRO Negative:

No HPV DNA detected. Repeat cervical cancer screening in 3 years.

When providing management advice, take into consideration past test results as per current American Society for Colposcopy and Cervical Pathology guidelines.

Cautions
Discusses conditions that may cause diagnostic confusion, including improper specimen collection and handling, inappropriate test selection, and interfering substances

Patients should refrain from using feminine hygiene products for approximately 24 hours prior to self-collection of the vaginal brush. Use of carbomer-containing feminine hygiene products has been associated with invalid results by the human papillomavirus (HPV) detection/genotyping assay. Carbomer-containing products include:

-Cardinal Health Lubricating Jelly

-Conceptrol Contraceptive Gel

-DynaLybe Lubricating Jelly

-HR lubricating Jelly

-IsoLove Balancing Gel

-KY Jelly (Physician Formula)

-Labicam anti-fungal

-Lavena Moisturizer

-McKesson Lubricating Jelly

-Medline Lubricating Jelly

-Metronidazole Vaginal Gel

-Monistat 1

-Terrasil Ointment Plus Cleansing Bar

-RepHresh Clean Balance

-RepHresh Vaginal Gel prefilled

-Replens Long-Lasting Vaginal Moisturizer

-Surgilube Surgical Lubricating Jelly

-Vagisil anti-itch cream

-Vagisil creme regular strength

-Vagisil ProHydrate

-Vagisil Sensitive Cream

-VCF Contraceptive Foam

-Walgreens Clotrimazole 3

-Walgreens Clotrimazole Vaginal Cream

 

The vaginal HPV self-collection should not be ordered if active menstrual bleeding or vaginal product use has occurred within 2 days.

 

Positive HPV results (about 1 in 10) will require a follow-up visit with a speculum exam. Patient should be counseled about that and agreeable to follow-up appointment if needed.

 

The cobas HPV test is US Food and Drug Administration (FDA)-approved for clinician-collected cervical and endocervical samples in PreservCyt (ThinPrep) media and for patient-collected vaginal samples using an Evalyn Brush in ThinPrep media.

 

The cobas HPV test detects DNA from high-risk genotypes 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68. This test does not detect DNA of HPV low-risk types (eg, 6, 11, 42, 43, 44) since these are not associated with cervical cancer and its precursor lesions.

 

Prevalence of HPV infection in a population may affect performance. Positive-predictive values decrease when testing populations with low prevalence or individuals with no risk of infection.

 

Infection with HPV is not an indicator of cytologic high-grade squamous intraepithelial lesion (HSIL) or underlying high-grade cervical intraepithelial neoplasia (CIN), nor does it imply that CIN2-3 or cancer will develop. Most women infected with 1 or more high-risk (HR) HPV types do not develop CIN2-3 or cancer.

 

A negative-HR-HPV result does not exclude the possibility of future cytologic HSIL or underlying CIN2-3 or cancer.

 

Human beta-globin amplification and detection is included in cobas HPV to differentiate HPV negative specimens from those that do not exhibit HPV signal due to insufficient cell mass in the specimen. All HPV negative specimens must have a valid beta-globin signal within a pre-defined range to be identified as valid negatives.

 

The cobas HPV test performance has not been validated with PreservCyt specimens that have been filled past the maximum fill line of the primary vial. ThinPrep vials that have had any additional PreservCyt fluid volume added or any dissimilar fluid volume added to the initial specimen should not be submitted for testing.

 

The presence of polymerase chain reaction inhibitors may cause false-negative or invalid results.

 

Human papillomavirus negative cancers of the cervix do occur in rare circumstances. Also, no cancer screening test is 100% sensitive. Use of this device for primary cervical cancer screening should be undertaken after carefully considering the performance characteristics put forth in the cobas HPV test label, as well as recommendations of professional guidelines.

 

The use of this test has not been evaluated for the management of women with prior ablative or excisional therapy, hysterectomy, who are pregnant or who have other risk factors (eg, HIV-positive, immunocompromised).

 

The effects of other potential variables (eg, vaginal discharge, use of tampons, and douching) and specimen collection variables have not been evaluated.

Clinical Reference
Recommendations for in-depth reading of a clinical nature

1. US Preventive Services Task Force, Curry SJ, Krist AH, et al. Screening for Cervical Cancer: US Preventive Services Task Force Recommendation Statement. JAMA. 2018;320(7):674-686. doi:10.1001/jama.2018.10897

2. Poljak M, Balencak AO, Cuschieri K, Bohinc KB, Arbyn M. 2023 Global inventory of commercial molecular tests for human papillomaviruses (HPV). J Clin Viro. 2024:172;1-10

3. Perkins RB, Guido RS, Castle PE, et al. 2019 ASCCP Risk-Based Management Consensus Guidelines for abnormal cervical cancer screening tests and cancer precursors. J Low Genit Tract Dis. 2020;24(2):102-131. doi:10.1097/LGT.0000000000000525

Method Description
Describes how the test is performed and provides a method-specific reference

The cobas HPV (human papillomavirus) test is a qualitative real-time polymerase chain reaction (PCR) test that detects 14 high-risk HPV genotypes. The test uses primers to define a sequence of approximately 200 nucleotides within the polymorphic L1 region of the HPV genome. A pool of HPV primers present in the Master Mix is designed to amplify HPV DNA from 14 high-risk types (16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68). An additional primer pair targets the human beta-globin gene (330 base pair amplicon) as an internal control to monitor the entire sample preparation and PCR amplification process. Fluorescent oligonucleotide probes bind to polymorphic regions within the sequence defined by these primers. The test utilizes a low titer positive and a negative control.(Package insert: cobas HPV: Qualitative nucleic acid test for the cobas 6800/8800 Systems. Roche Diagnostics; Rev. 2.0, 03/2021)

PDF Report
Indicates whether the report includes an additional document with charts, images or other enriched information

No

Day(s) Performed
Outlines the days the test is performed. This field reflects the day that the sample must be in the testing laboratory to begin the testing process and includes any specimen preparation and processing time before the test is performed. Some tests are listed as continuously performed, which means that assays are performed multiple times during the day.

Monday through Saturday

Report Available
The interval of time (receipt of sample at Mayo Clinic Laboratories to results available) taking into account standard setup days and weekends. The first day is the time that it typically takes for a result to be available. The last day is the time it might take, accounting for any necessary repeated testing.

3 to 6 days

Specimen Retention Time
Outlines the length of time after testing that a specimen is kept in the laboratory before it is discarded

2 weeks

Performing Laboratory Location
Indicates the location of the laboratory that performs the test

Rochester

Fees
Several factors determine the fee charged to perform a test. Contact your U.S. or International Regional Manager for information about establishing a fee schedule or to learn more about resources to optimize test selection.

  • Authorized users can sign in to Test Prices for detailed fee information.
  • Clients without access to Test Prices can contact Customer Service 24 hours a day, seven days a week.
  • Prospective clients should contact their account representative. For assistance, contact Customer Service.

Test Classification
Provides information regarding the medical device classification for laboratory test kits and reagents. Tests may be classified as cleared or approved by the US Food and Drug Administration (FDA) and used per manufacturer instructions, or as products that do not undergo full FDA review and approval, and are then labeled as an Analyte Specific Reagent (ASR) product.

This test has been cleared, approved, or is exempt by the US Food and Drug Administration and is used per manufacturer's instructions. Performance characteristics were verified by Mayo Clinic in a manner consistent with CLIA requirements.

CPT Code Information
Provides guidance in determining the appropriate Current Procedural Terminology (CPT) code(s) information for each test or profile. The listed CPT codes reflect Mayo Clinic Laboratories interpretation of CPT coding requirements. It is the responsibility of each laboratory to determine correct CPT codes to use for billing.

CPT codes are provided by the performing laboratory.

87626

LOINC® Information
Provides guidance in determining the Logical Observation Identifiers Names and Codes (LOINC) values for the order and results codes of this test. LOINC values are provided by the performing laboratory.

Test Id Test Order Name Order LOINC Value
SCHPV HPV Detect/Geno SelfCollect, Vagina 77378-8
Result Id Test Result Name Result LOINC Value
Applies only to results expressed in units of measure originally reported by the performing laboratory. These values do not apply to results that are converted to other units of measure.
621928 HPV High Risk type 16, PCR 61372-9
621929 HPV High Risk type 18, PCR 61373-7
621930 HPV other High Risk types, PCR 77375-4

Test Setup Resources

Setup Files
Test setup information contains test file definition details to support order and result interfacing between Mayo Clinic Laboratories and your Laboratory Information System.

Excel | Pdf

Sample Reports
Normal and Abnormal sample reports are provided as references for report appearance.

Normal Reports | Abnormal Reports

SI Sample Reports
International System (SI) of Unit reports are provided for a limited number of tests. These reports are intended for international account use and are only available through MayoLINK accounts that have been defined to receive them.

SI Normal Reports | SI Abnormal Reports

Test Update Resources

Change Type Effective Date
New Test 2025-02-04