Test Catalog

Test Id : GNADM

Hereditary Thrombotic Thrombocytopenic Purpura, ADAMTS13 Gene, Next-Generation Sequencing, Varies

Useful For
Suggests clinical disorders or settings where the test may be helpful

Evaluating hereditary thrombotic thrombocytopenic purpura (TTP) in patients with a personal or family history suggestive of thrombotic microangiopathy

 

Confirming a hereditary TTP diagnosis with the identification of known or suspected disease-causing alteration(s) in the ADAMTS13 gene

 

Determining the disease-causing alterations within the ADAMTS13 gene to delineate the underlying molecular defect in a patient with a laboratory diagnosis of hereditary TTP

 

Identifying the causative alterations for genetic counseling purposes

 

Prognosis and risk assessment based on the genotype-phenotype correlations

 

Carrier testing for close family members of an individual with a diagnosis of hereditary TTP

 

This test is not intended for prenatal diagnosis.

Genetics Test Information
Provides information that may help with selection of the correct genetic test or proper submission of the test request

This test utilizes next-generation sequencing to detect single nucleotide and copy number variants in the ADAMTS13 gene associated with hereditary thrombotic thrombocytopenic purpura (TTP). See Method Description for additional details.

 

Identification of a disease-causing variant may assist with diagnosis, prognosis, clinical management, recurrence risk assessment, familial screening, and genetic counseling for hereditary TTP.

Testing Algorithm
Delineates situations when tests are added to the initial order. This includes reflex and additional tests.

The clinical workup for hereditary thrombotic thrombocytopenic purpura (TTP)  should begin with a plasma ADAMTS-13 (a disintegrin and metalloprotease with thrombospondin type 1 motif 13 repeats) activity assay performed on a specimen collected before initiation of plasma therapy.

 

Clinical scoring systems, such as the PLASMIC score, may assist in providing guidance for the necessity of ADAMTS-13 activity testing.(1)

 

Genetic testing for hereditary TTP is indicated if:

-ADAMTS-13 activity is less than 10% and a functional inhibitor screen as measured by the Bethesda assay is negative (defined as less than 0.4 Bethesda units)

-Non-TTP medical conditions that may be associated with severe ADAMTS-13 deficiency (< or =10%) have been excluded, eg, hemolytic uremic syndrome, hematopoietic stem cell and solid-organ transplantation, liver disease, disseminated intravascular coagulation, malignancy, viral infection (eg, HIV), sepsis, pregnancy (preeclampsia/eclampsia or HELLP [hemolysis, elevated liver enzymes and low platelets] syndrome), and medications, such as antiplatelet agents, calcineurin inhibitors, and certain chemotherapeutics

 

International expert groups have provided recommendations on best practices for ADAMTS-13 assays in clinical laboratories and established testing algorithms for the identification of TTP.(2,3)

Method Name
A short description of the method used to perform the test

Sequence Capture and Targeted Next-Generation Sequencing (NGS) followed by Polymerase Chain Reaction (PCR) and Sanger Sequencing

NY State Available
Indicates the status of NY State approval and if the test is orderable for NY State clients.

Yes

Reporting Name
Lists a shorter or abbreviated version of the Published Name for a test

ADAMTS13 Gene, Full Gene NGS

Aliases
Lists additional common names for a test, as an aid in searching

NextGen Sequencing Test

Congenital thrombotic thrombocytopenic purpura

Congenital TTP

cTTP

Hereditary TTP

hTTP

Microangiopathic hemolytic anemia, congenital

Microangiopathic hemolytic anemia

MAHA

Thrombocytic microangiopathy, familial

Thrombotic thrombocytopenic purpura, familial

Upshaw-Schulman syndrome

USS

Testing Algorithm
Delineates situations when tests are added to the initial order. This includes reflex and additional tests.

The clinical workup for hereditary thrombotic thrombocytopenic purpura (TTP)  should begin with a plasma ADAMTS-13 (a disintegrin and metalloprotease with thrombospondin type 1 motif 13 repeats) activity assay performed on a specimen collected before initiation of plasma therapy.

 

Clinical scoring systems, such as the PLASMIC score, may assist in providing guidance for the necessity of ADAMTS-13 activity testing.(1)

 

Genetic testing for hereditary TTP is indicated if:

-ADAMTS-13 activity is less than 10% and a functional inhibitor screen as measured by the Bethesda assay is negative (defined as less than 0.4 Bethesda units)

-Non-TTP medical conditions that may be associated with severe ADAMTS-13 deficiency (< or =10%) have been excluded, eg, hemolytic uremic syndrome, hematopoietic stem cell and solid-organ transplantation, liver disease, disseminated intravascular coagulation, malignancy, viral infection (eg, HIV), sepsis, pregnancy (preeclampsia/eclampsia or HELLP [hemolysis, elevated liver enzymes and low platelets] syndrome), and medications, such as antiplatelet agents, calcineurin inhibitors, and certain chemotherapeutics

 

International expert groups have provided recommendations on best practices for ADAMTS-13 assays in clinical laboratories and established testing algorithms for the identification of TTP.(2,3)

Specimen Type
Describes the specimen type validated for testing

Varies

Ordering Guidance

This test is designed to detect disease-causing variants in the ADAMTS13 gene and to be utilized for genetic confirmation of a clinical diagnosis of hereditary thrombotic thrombocytopenic purpura (TTP). Genetic testing for hereditary TTP should only be considered if a patient’s clinical presentation and initial ADAMTS-13 activity and functional inhibitor screens indicate a diagnosis.

 

This test does not measure ADAMTS-13 activity or the presence/absence of inhibitors. For assessment of ADAMTS-13 activity and inhibitor status, order ADM13 / ADAMTS13 Activity and Inhibitor Profile, Plasma.

 

Testing for the ADAMTS13 gene as part of a customized panel is available. For more information see CGPH / Custom Gene Panel, Hereditary, Next-Generation Sequencing, Varies

 

Targeted testing for familial variants (also called site-specific or known variants testing) is available for the ADAMTS13 gene. See FMTT / Familial Variant, Targeted Testing, Varies. To obtain more information about this testing option, call 800-533-1710.

Shipping Instructions

Specimen preferred to arrive within 96 hours of collection.

Necessary Information

Rare Coagulation Disorder Patient Information is required. Testing may proceed without the patient information. However, the information aids in providing a more thorough interpretation. Ordering providers are strongly encouraged to fill out the form and send it with the specimen.

Specimen Required
Defines the optimal specimen required to perform the test and the preferred volume to complete testing

Specimen Type: Whole blood

Patient Preparation: A previous bone marrow transplant from an allogenic donor will interfere with testing. Call 800-533-1710 for instructions for testing patients who have received a bone marrow transplant.

Container/Tube:

Preferred: Lavender top (EDTA)

Acceptable: Yellow top (ACD)

Specimen Volume: 3 mL

Collection Instructions:

1. Invert several times to mix blood.

2. Send whole blood specimen in original tube. Do not aliquot.

Specimen Stability Information: Ambient (preferred) 4 days/Refrigerated

Special Instructions
Library of PDFs including pertinent information and forms related to the test

Forms

1. Rare Coagulation Disorder Patient Information (T824) is required.

2. New York Clients-Informed consent is required. Document on the request form or electronic order that a copy is on file. The following documents are available:

-Informed Consent for Genetic Testing (T576)

-Informed Consent for Genetic Testing (Spanish) (T826)

Specimen Minimum Volume
Defines the amount of sample necessary to provide a clinically relevant result as determined by the testing laboratory. The minimum volume is sufficient for one attempt at testing.

1 mL

Reject Due To
Identifies specimen types and conditions that may cause the specimen to be rejected

All specimens will be evaluated at Mayo Clinic Laboratories for test suitability.

Specimen Stability Information
Provides a description of the temperatures required to transport a specimen to the performing laboratory, alternate acceptable temperatures are also included

Specimen Type Temperature Time Special Container
Varies Varies

Useful For
Suggests clinical disorders or settings where the test may be helpful

Evaluating hereditary thrombotic thrombocytopenic purpura (TTP) in patients with a personal or family history suggestive of thrombotic microangiopathy

 

Confirming a hereditary TTP diagnosis with the identification of known or suspected disease-causing alteration(s) in the ADAMTS13 gene

 

Determining the disease-causing alterations within the ADAMTS13 gene to delineate the underlying molecular defect in a patient with a laboratory diagnosis of hereditary TTP

 

Identifying the causative alterations for genetic counseling purposes

 

Prognosis and risk assessment based on the genotype-phenotype correlations

 

Carrier testing for close family members of an individual with a diagnosis of hereditary TTP

 

This test is not intended for prenatal diagnosis.

Genetics Test Information
Provides information that may help with selection of the correct genetic test or proper submission of the test request

This test utilizes next-generation sequencing to detect single nucleotide and copy number variants in the ADAMTS13 gene associated with hereditary thrombotic thrombocytopenic purpura (TTP). See Method Description for additional details.

 

Identification of a disease-causing variant may assist with diagnosis, prognosis, clinical management, recurrence risk assessment, familial screening, and genetic counseling for hereditary TTP.

Testing Algorithm
Delineates situations when tests are added to the initial order. This includes reflex and additional tests.

The clinical workup for hereditary thrombotic thrombocytopenic purpura (TTP)  should begin with a plasma ADAMTS-13 (a disintegrin and metalloprotease with thrombospondin type 1 motif 13 repeats) activity assay performed on a specimen collected before initiation of plasma therapy.

 

Clinical scoring systems, such as the PLASMIC score, may assist in providing guidance for the necessity of ADAMTS-13 activity testing.(1)

 

Genetic testing for hereditary TTP is indicated if:

-ADAMTS-13 activity is less than 10% and a functional inhibitor screen as measured by the Bethesda assay is negative (defined as less than 0.4 Bethesda units)

-Non-TTP medical conditions that may be associated with severe ADAMTS-13 deficiency (< or =10%) have been excluded, eg, hemolytic uremic syndrome, hematopoietic stem cell and solid-organ transplantation, liver disease, disseminated intravascular coagulation, malignancy, viral infection (eg, HIV), sepsis, pregnancy (preeclampsia/eclampsia or HELLP [hemolysis, elevated liver enzymes and low platelets] syndrome), and medications, such as antiplatelet agents, calcineurin inhibitors, and certain chemotherapeutics

 

International expert groups have provided recommendations on best practices for ADAMTS-13 assays in clinical laboratories and established testing algorithms for the identification of TTP.(2,3)

Clinical Information
Discusses physiology, pathophysiology, and general clinical aspects, as they relate to a laboratory test

Hereditary thrombotic thrombocytopenic purpura (TTP), also known as Upshaw-Schulman syndrome or congenital TTP (cTTP), is a rare blood condition associated with germline variants in the ADAMTS13 gene. It is inherited in an autosomal recesssive manner with variable expressivity.(4)

 

Hereditary TTP is characterized by a severe deficiency of the ADAMTS-13 (a disintegrin and metalloproteinase with thrombospondin type 1 motif 13) protease resulting in the abnormal accumulation of ultra-large von Willebrand factor multimers, which are thought to aggregate with platelets to form occlusive microvascular platelet-rich thrombi.(3-5)

 

Systemic platelet thrombi lead to the classic pentad of TTP findings: thrombocytopenia, microangiopathic hemolytic anemia (intravascular hemolysis and presence of peripheral blood schistocytes), fever, neurologic symptoms (ischemic attack and stroke), and kidney dysfunction. While some individuals with hereditary TTP may have symptoms that present at birth, others can remain asymptomatic for decades. Although patients are at significant risk for complications of microvascular thrombosis throughout their lives, two periods appear to be associated with particularly severe risk: the first days of life and pregnancy.(5,6)

 

Acquired, immune-mediated TTP (caused by the presence of autoantibodies to ADAMTS-13) is more common than hereditary TTP and can be distinguished through ADAMTS-13 antibody or inhibitor assays.(3)

 

Several other non-TTP causes of thrombotic microangiopathy and severe ADAMTS-13 deficiency should be excluded prior to genetic testing, including hemolytic uremic syndrome, hematopoietic stem cell and solid-organ transplantation, liver disease, disseminated intravascular coagulation, malignancy, viral infection (eg, HIV), sepsis, pregnancy (preeclampsia/eclampsia or HELLP [hemolysis, elevated liver enzymes and low platelets] syndrome), and medications, such as antiplatelet agents, calcineurin inhibitors, and certain chemotherapeutics.(3,7,8)

Reference Values
Describes reference intervals and additional information for interpretation of test results. May include intervals based on age and sex when appropriate. Intervals are Mayo-derived, unless otherwise designated. If an interpretive report is provided, the reference value field will state this.

An interpretive report will be provided.

Interpretation
Provides information to assist in interpretation of the test results

All detected variants are evaluated according to American College of Medical Genetics and Genomics recommendations.(10) Variants are classified based on known, predicted, or possible pathogenicity and reported with interpretive comments detailing their potential or known significance.

Cautions
Discusses conditions that may cause diagnostic confusion, including improper specimen collection and handling, inappropriate test selection, and interfering substances

Clinical Correlations:

Test results should be interpreted in the context of clinical findings, family history, and other laboratory data. Misinterpretation of results may occur if the information provided is inaccurate or incomplete.

 

If testing was performed because of a clinically significant family history, it is often useful to first test an affected family member. Detection of a reportable variant in an affected family member would allow for more informative testing of at-risk individuals.

 

To discuss the availability of additional testing options or for assistance in the interpretation of these results, contact the Mayo Clinic Laboratories genetic counselors at 800-533-1710.

 

Technical Limitations:

Next-generation sequencing may not detect all types of genomic variants. In rare cases, false-negative or false-positive results may occur. The depth of coverage may be variable for some target regions; assay performance below the minimum acceptable criteria or for failed regions will be noted. Given these limitations, negative results do not rule out the diagnosis of a genetic disorder. If a specific clinical disorder is suspected, evaluation by alternative methods can be considered.

 

There may be regions of genes that cannot be effectively evaluated by sequencing or deletion and duplication analysis as a result of technical limitations of the assay, including regions of homology, high guanine-cytosine (GC) content, and repetitive sequences. Confirmation of select reportable variants will be performed by alternate methodologies based on internal laboratory criteria.

 

This test is validated to detect 95% of deletions up to 75 base pairs (bp) and insertions up to 47 bp. Deletions-insertions (delins) of 40 or more bp, including mobile element insertions, may be less reliably detected than smaller delins.

 

Deletion/Duplication Analysis:

This analysis targets single and multi-exon deletions/duplications; however, in some instances, single exon resolution cannot be achieved due to isolated reduction in sequence coverage or inherent genomic complexity. Balanced structural rearrangements (such as translocations and inversions) may not be detected.

 

This test is not designed to detect low levels of mosaicism or to differentiate between somatic and germline variants. If there is a possibility that any detected variant is somatic, additional testing may be necessary to clarify the significance of results.

 

For detailed information regarding gene-specific performance and technical limitations, see Method Description or contact a laboratory genetic counselor.

 

If the patient has had an allogeneic hematopoietic stem cell transplant or a recent blood transfusion, results may be inaccurate due to the presence of donor DNA. Call Mayo Clinic Laboratories for instructions for testing patients who have received a bone marrow transplant.

 

Reclassification of Variants:

Currently, it is not standard practice for the laboratory to systematically review previously classified variants on a regular basis. The laboratory encourages healthcare providers to contact the laboratory at any time to learn how the classification of a particular variant may have changed over time. Due to broadening genetic knowledge, it is possible that the laboratory may discover new information of relevance to the patient. Should that occur, the laboratory may issue an amended report.

 

Variant Evaluation:

Evaluation and categorization of variants are performed using published American College of Medical Genetics and Genomics and the Association for Molecular Pathology recommendations as a guideline.(10) Other gene-specific guidelines may also be considered. Variants are classified based on known, predicted, or possible pathogenicity and reported with interpretive comments detailing their potential or known significance. Variants classified as benign or likely benign are not reported.

 

Multiple in silico evaluation tools may be used to assist in the interpretation of these results. The accuracy of predictions made by in silico evaluation tools is highly dependent upon the data available for a given gene, and periodic updates to these tools may cause predictions to change over time. Results from in silico evaluation tools should be interpreted with caution and professional clinical judgment.

 

Rarely, incidental or secondary findings may implicate another predisposition or presence of active disease. These findings will be carefully reviewed to determine whether they will be reported.

Clinical Reference
Recommendations for in-depth reading of a clinical nature

1. Bendapudi PK, Hurwitz S, Fry A, et al: Derivation and external validation of the PLASMIC score for rapid assessment of adults with thrombotic microangiopathies: a cohort study. Lancet Haematol. 2017 Apr;4(4):e157-e164

2. Scully M, Cataland S, Coppo P, et al; International Working Group for Thrombotic Thrombocytopenic Purpura: Consensus on the standardization of terminology in thrombotic thrombocytopenic purpura and related thrombotic microangiopathies. J Thromb Haemost. 2017 Feb;15(2):312-322

3. Mackie I, Mancini I, Muia J, et al: International Council for Standardization in Haematology (ICSH) recommendations for laboratory measurement of ADAMTS13. Int J Lab Hematol. 2020 Dec;42(6):685-696

4. Alwan F Vendramin C, Liesner R, et al: Characterization and treatment of congenital thrombotic thrombocytopenic purpura. Blood. 2019 Apr 11;133(15):1644-1651

5. Smock KJ: ADAMTS13 testing update: Focus on laboratory aspects of difficult thrombotic thrombocytopenic purpura diagnoses and effects of new therapies. Int J Lab Hematol. 2021 Jul;43 Suppl 1:103-108

6. Hovinga JAK, George JN: Hereditary thrombotic thrombocytopenic purpura. N Engl J Med. 2019 Oct 24;381(17):1653-1662

7. Saha M, McDaniel JK, Zheng XL: Thrombotic thrombocytopenic purpura: pathogenesis, diagnosis and potential novel therapeutics. J Thromb Haemost. 2017 Oct;15(10):1889-1900

8. Zuno JAN: Thrombotic thrombocytopenic purpura evaluation and management. In: Khaddour K, ed. StatPearls [Internet]. StatPearls Publishing; 2021. Updated July 25, 2022. Accessed November 28, 2022. Available at www.statpearls.com/articlelibrary/viewarticle/30113

9. George JN: Thrombotic thrombocytopenic purpura: From 1972 to 2022 and beyond. Semin Thromb Hemost. 2022 Nov;48(8):926-936

10. Richards S, Aziz N, Bale S, et al; ACMG Laboratory Quality Assurance Committee: Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet Med. 2015 May;17(5):405-424

Method Description
Describes how the test is performed and provides a method-specific reference

Next-generation sequencing (NGS) and/or Sanger sequencing are performed to test for the presence of variants in coding regions and intron/exon boundaries of the ADAMTS13 gene, as well as some other regions that have known disease-causing variants. The human genome reference GRCh37/hg19 build was used for sequence read alignment. At least 99% of the bases are covered at a read depth over 30X. Sensitivity is estimated at above 99% for single nucleotide variants, above 94% for deletions-insertions (delins) less than 40 base pairs (bp), above 95% for deletions up to 75 bp and insertions up to 47 bp. NGS and/or a polymerase chain reaction-based quantitative method is performed to test for the presence of deletions and duplications in the ADAMTS13 gene.

 

There may be regions of the ADAMTS13 gene that cannot be effectively evaluated by sequencing or deletion and duplication analysis as a result of technical limitations of the assay, including regions of homology, high guanine-cytosine (GC) content, and repetitive sequences.(Unpublished Mayo method)

 

The reference transcript for ADAMTS13 is NM_139025.4. Reference transcript numbers may be updated due to transcript re-versioning. Always refer to the final patient report for gene transcript information referenced at the time of testing. Confirmation of select reportable variants may be performed by alternate methodologies based on internal laboratory criteria.

PDF Report
Indicates whether the report includes an additional document with charts, images or other enriched information

Supplemental

Day(s) Performed
Outlines the days the test is performed. This field reflects the day that the sample must be in the testing laboratory to begin the testing process and includes any specimen preparation and processing time before the test is performed. Some tests are listed as continuously performed, which means that assays are performed multiple times during the day.

Varies

Report Available
The interval of time (receipt of sample at Mayo Clinic Laboratories to results available) taking into account standard setup days and weekends. The first day is the time that it typically takes for a result to be available. The last day is the time it might take, accounting for any necessary repeated testing.

28 to 42 days

Specimen Retention Time
Outlines the length of time after testing that a specimen is kept in the laboratory before it is discarded

Whole blood: 2 weeks (if available); Extracted DNA: 3 months

Performing Laboratory Location
Indicates the location of the laboratory that performs the test

Rochester

Fees :
Several factors determine the fee charged to perform a test. Contact your U.S. or International Regional Manager for information about establishing a fee schedule or to learn more about resources to optimize test selection.

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  • Clients without access to Test Prices can contact Customer Service 24 hours a day, seven days a week.
  • Prospective clients should contact their account representative. For assistance, contact Customer Service.

Test Classification
Provides information regarding the medical device classification for laboratory test kits and reagents. Tests may be classified as cleared or approved by the US Food and Drug Administration (FDA) and used per manufacturer instructions, or as products that do not undergo full FDA review and approval, and are then labeled as an Analyte Specific Reagent (ASR) product.

This test was developed and its performance characteristics determined by Mayo Clinic in a manner consistent with CLIA requirements. It has not been cleared or approved by the US Food and Drug Administration.

CPT Code Information
Provides guidance in determining the appropriate Current Procedural Terminology (CPT) code(s) information for each test or profile. The listed CPT codes reflect Mayo Clinic Laboratories interpretation of CPT coding requirements. It is the responsibility of each laboratory to determine correct CPT codes to use for billing.

CPT codes are provided by the performing laboratory.

81479

LOINC® Information
Provides guidance in determining the Logical Observation Identifiers Names and Codes (LOINC) values for the order and results codes of this test. LOINC values are provided by the performing laboratory.

Test Id Test Order Name Order LOINC Value
GNADM ADAMTS13 Gene, Full Gene NGS 99960-7
Result Id Test Result Name Result LOINC Value
Applies only to results expressed in units of measure originally reported by the performing laboratory. These values do not apply to results that are converted to other units of measure.
619230 Test Description 62364-5
619231 Specimen 31208-2
619232 Source 31208-2
619233 Result Summary 50397-9
619234 Result 82939-0
619235 Interpretation 69047-9
619236 Additional Results 82939-0
619237 Resources 99622-3
619238 Additional Information 48767-8
619239 Method 85069-3
619240 Genes Analyzed 82939-0
619241 Disclaimer 62364-5
619242 Released By 18771-6

Test Setup Resources

Setup Files
Test setup information contains test file definition details to support order and result interfacing between Mayo Clinic Laboratories and your Laboratory Information System.

Excel | Pdf

Sample Reports
Normal and Abnormal sample reports are provided as references for report appearance.

Normal Reports | Abnormal Reports

SI Sample Reports
International System (SI) of Unit reports are provided for a limited number of tests. These reports are intended for international account use and are only available through MayoLINK accounts that have been defined to receive them.

SI Normal Reports | SI Abnormal Reports

Test Update Resources

Change Type Effective Date
New Test 2023-06-01